Impact of AKAP6 polymorphisms on Glioma susceptibility and prognosis

BMC Neurol. 2019 Nov 23;19(1):296. doi: 10.1186/s12883-019-1504-2.

Abstract

Purpose: Glioma is the most common primary malignant brain tumor with high mortality and poor prognosis. Our aim was to clarify the correlation between Kinase-anchored protein 6 (AKAP6) gene polymorphisms and glioma susceptibility and prognosis in Chinese Han population.

Methods: Five single-nucleotide polymorphisms (SNPs) of AKAP6 were genotyped by Agena MassARRAY in 575 glioma patients and 500 healthy controls. Logistic regression model was utilized to calculate odds ratios (OR) and 95% confidence intervals (CI). The associations between polymorphisms and survival were assessed using the log-rank test, Kaplan-Meier analysis and Cox regression model.

Results: We found that rs2239647 polymorphism was strongly associated with an increased risk of glioma (OR = 1.90, p = 0.007) and a worse prognosis for glioma, especially in high-grade glioma (HR = 1.67, p = 0.034). Stratified analysis showed that rs2239647 increased the risk of glioma in female (OR = 1.62, p = 0.016). Whereas, rs4261436 (HR = 0.70, p = 0.045) and rs17522122 (HR = 0.75, p = 0.016) were associated with better prognosis of astrocytoma. In addition, we also found that surgical methods and chemotherapy are critical factors for the prognosis of glioma patients.

Conclusions: This study firstly provided evidence for the impact of AKAP6 polymorphisms on susceptibility and prognosis of glioma, suggesting AKAP6 variants might have potential roles in the etiology of glioma.

Keywords: AKAP6; Glioma; Prognosis; Single nucleotide polymorphisms; Susceptibility.

MeSH terms

  • A Kinase Anchor Proteins / genetics*
  • Adult
  • Asian People / genetics
  • Astrocytoma / pathology
  • Brain Neoplasms / genetics*
  • Brain Neoplasms / pathology
  • Case-Control Studies
  • Female
  • Genetic Predisposition to Disease*
  • Genotype
  • Glioma / genetics*
  • Glioma / pathology
  • Humans
  • Kaplan-Meier Estimate
  • Male
  • Middle Aged
  • Polymorphism, Single Nucleotide
  • Prognosis
  • Young Adult

Substances

  • A Kinase Anchor Proteins
  • AKAP6 protein, human