Major challenges in accurate mutation detection of multifocal lung adenocarcinoma by next-generation sequencing

Cancer Biol Ther. 2020;21(2):170-177. doi: 10.1080/15384047.2019.1674070. Epub 2019 Oct 25.

Abstract

Background: Many patients with advanced non-small cell lung cancer manifested with metastasis, and molecular heterogeneity may exhibit between primary and metastatic tumors. We sought to investigate the clinical detection strategy of primary and metastatic tumors in Chinese patients with NSCLC.Methods: Here, 77 paired tumors of Chinese patients with lung adenocarcinoma were analyzed, and 1836 mutation in hotspot regions of 22 genes were identified by next-generation sequencing. The expression of ALK in these paired tumors was also detected by immunohistochemistry.Results: The results showed that the concordance rate in multiple pulmonary nodules, primary-LN metastasis pairs and primary-distant metastasis pairs was 67.7%, 94.1% and 86.7%, respectively. In multiple pulmonary nodules, the concordance rate was 100% when the pathologic diagnosis was intrapulmonary metastasis, whereas the concordance rate was 23.1% when the pathologic diagnosis was multiple primary tumors. TP53 and CTNNB1 mutations were detected as the recurrent alterations in LN metastasis. Moreover, the concordance of ALK status was observed in these pairs.Conclusions: Our data suggested that hotspot mutations and ALK status in the primary-metastasis pairs had a high concordance in lung adenocarcinoma. Clinical detection of one lesion may be enough to identify the key alterations except that patients are diagnosed with multiple primary tumors or have disease progression after benefiting from target therapy.

Keywords: Lung adenocarcinoma; immunohistochemistry; mutation; next-generation sequencing; tumor heterogeneity.

Publication types

  • Research Support, Non-U.S. Gov't

MeSH terms

  • Adenocarcinoma of Lung / genetics
  • Adenocarcinoma of Lung / secondary*
  • Adenocarcinoma of Lung / surgery
  • Biomarkers, Tumor / genetics*
  • Carcinoma, Non-Small-Cell Lung / genetics
  • Carcinoma, Non-Small-Cell Lung / secondary*
  • Carcinoma, Non-Small-Cell Lung / surgery
  • DNA Mutational Analysis
  • High-Throughput Nucleotide Sequencing
  • Humans
  • Lung Neoplasms / genetics
  • Lung Neoplasms / pathology*
  • Lung Neoplasms / surgery
  • Lymphatic Metastasis
  • Multiple Pulmonary Nodules / genetics
  • Multiple Pulmonary Nodules / pathology*
  • Multiple Pulmonary Nodules / surgery
  • Mutation*
  • Prognosis
  • Solitary Pulmonary Nodule / genetics
  • Solitary Pulmonary Nodule / pathology*
  • Solitary Pulmonary Nodule / surgery
  • Survival Rate

Substances

  • Biomarkers, Tumor

Grants and funding

This work was supported by Central Public-interest Scientific Institution Basal Research Fund [grant number 2015PT320019] and the National Natural Science Foundation of China [grant number 21703290].