Preparation of Proteins and Macromolecular Assemblies for Cryo-electron Microscopy

Methods Mol Biol. 2020:2073:221-246. doi: 10.1007/978-1-4939-9869-2_13.

Abstract

Cryo-electron microscopy has become popular as the penultimate step on the road to structure determination for many proteins and macromolecular assemblies. The process of obtaining high-resolution images of a purified biomolecular complex in an electron microscope often follows a long, and in many cases exhaustive screening process in which many iterative rounds of protein purification are employed and the sample preparation procedure progressively re-evaluated in order to improve the distribution of particles visualized under the electron microscope, and thus maximize the opportunity for high-resolution structure determination. Typically, negative stain electron microscopy is employed to obtain a preliminary assessment of the sample quality, followed by cryo-EM which first requires the identification of optimal vitrification conditions. The original methods for frozen-hydrated specimen preparation developed over 40 years ago still enjoy widespread use today, although recent developments have set the scene for a future where more systematic and high-throughput approaches to the preparation of vitrified biomolecular complexes may be routinely employed. Here we summarize current approaches and ongoing innovations for the preparation of frozen-hydrated single particle specimens for cryo-EM, highlighting some of the commonly encountered problems and approaches that may help overcome these.

Keywords: Cryo-EM; Frozen-hydrated specimens; Macromolecular assemblies; Negative staining; Plunge-freezing; Protein complexes.

MeSH terms

  • Cryoelectron Microscopy
  • Macromolecular Substances / chemistry
  • Macromolecular Substances / ultrastructure
  • Proteins / chemistry*
  • Proteins / ultrastructure

Substances

  • Macromolecular Substances
  • Proteins