Characterization of a Novel HIV-1 Recombinant Form (CRF01_AE/CRF07_BC/CRF08_BC) Identified from Guangxi, China

AIDS Res Hum Retroviruses. 2020 Feb;36(2):143-152. doi: 10.1089/AID.2019.0185. Epub 2019 Nov 11.

Abstract

Recently, more and more kinds of circulating recombinant forms (CRFs) and unique recombinant forms (URFs) were identified in the population in China. A novel HIV-1 recombinant virus (2016GXNNIDU016) was identified in this study, which was isolated from an HIV-1 infected intravenous drug user in Nanning, the capital of Guangxi, China. Phylogenetic analysis of the near full-length genome (NFLG) indicated that the sequence (2016GXNNIDU016) was a monophyletic branch that did not cluster with any previously identified genotype. Recombinant analysis showed that the NFLG of 2016GXNNIDU016 is composed of CRF07_BC, CRF01_AE, and CRF08_BC, including nine mosaic segments. Differing from previously documented CRF01_AE and CRF07/08_BC recombinant forms, 2016GXNNIDU016 increases the genetic complexity of HIV-1 in Guangxi. The constant emergence of novel recombinant forms should draw our attention to make more efforts in supervising and preventing the spread of HIV infection.

Keywords: CRF01_AE/CRF07_BC/CRF08_BC; HIV-1; URF; recombinant form.

Publication types

  • Research Support, Non-U.S. Gov't

MeSH terms

  • Adult
  • China
  • Drug Users*
  • Female
  • Genome, Viral*
  • Genotype
  • HIV Infections / virology*
  • HIV-1 / genetics*
  • HIV-1 / isolation & purification*
  • Humans
  • Phylogeny
  • Recombination, Genetic*
  • Sequence Analysis, DNA