A circRNA signature predicts postoperative recurrence in stage II/III colon cancer

EMBO Mol Med. 2019 Oct;11(10):e10168. doi: 10.15252/emmm.201810168. Epub 2019 Sep 2.

Abstract

Accurate risk stratification for patients with stage II/III colon cancer is pivotal for postoperative treatment decisions. Here, we aimed to identify and validate a circRNA-based signature that could improve postoperative prognostic stratification for these patients. In current retrospective analysis, we included 667 patients with R0 resected stage II/III colon cancer. Using RNA-seq analysis of 20 paired frozen tissues collected postoperation, we profiled differential circRNA expression between patients with and without recurrence, followed by quantitative validation. With clinical information, we generated a four-circRNA-based cirScore to classify patients into high-risk and low-risk groups in the training cohort. The patients with high cirScores in the training cohort had a shorter disease-free survival (DFS) and overall survival (OS) than patients with low cirScores. The prognostic capacity of the classifier was validated in the internal and external cohorts. Loss-of-function assays indicated that the selected circRNAs played functional roles in colon cancer progression. Overall, our four-circRNA-based classifier is a reliable prognostic tool for postoperative disease recurrence in patients with stage II/III colon cancer.

Keywords: biomarker; circular RNA; recurrence; stage II/III colon cancer.

Publication types

  • Research Support, Non-U.S. Gov't

MeSH terms

  • Aged
  • Biopsy
  • Clinical Decision Rules
  • Colon / pathology
  • Colonic Neoplasms / diagnosis*
  • Female
  • Follow-Up Studies
  • Humans
  • Male
  • Middle Aged
  • Neoplasm Recurrence, Local / diagnosis*
  • Prognosis
  • RNA, Circular / analysis*
  • Retrospective Studies
  • Survival Analysis

Substances

  • RNA, Circular

Associated data

  • SRA/PRJNA551560
  • SRA/PRJCA001113