Construction of a synthetic pathway for the production of 1,3-propanediol from glucose

Sci Rep. 2019 Aug 9;9(1):11576. doi: 10.1038/s41598-019-48091-7.

Abstract

In this work, we describe the construction of a synthetic metabolic pathway enabling direct biosynthesis of 1,3-propanediol (PDO) from glucose via the Krebs cycle intermediate malate. This non-natural pathway extends a previously published synthetic pathway for the synthesis of (L)-2,4-dihydroxybutyrate (L-DHB) from malate by three additional reaction steps catalyzed respectively, by a DHB dehydrogenase, a 2-keto-4-hydroxybutyrate (OHB) dehydrogenase and a PDO oxidoreductase. Screening and structure-guided protein engineering provided a (L)-DHB dehydrogenase from the membrane-associated (L)-lactate dehydrogenase of E. coli and OHB decarboxylase variants derived from the branched-chain keto-acid decarboxylase encoded by kdcA from Lactococcus lactis or pyruvate decarboxylase from Zymomonas mobilis. The simultaneous overexpression of the genes encoding these enzymes together with the endogenous ydhD-encoded aldehyde reductase enabled PDO biosynthesis from (L)-DHB. While the simultaneous expression of the six enzymatic activities in a single engineered E. coli strain resulted in a low production of 0.1 mM PDO from 110 mM glucose, a 40-fold increased PDO titer was obtained by co-cultivation of an E. coli strain expressing the malate-DHB pathway with another strain harboring the DHB-to-PDO pathway.

Publication types

  • Research Support, Non-U.S. Gov't

MeSH terms

  • Biosynthetic Pathways
  • Citric Acid Cycle
  • Escherichia coli / enzymology
  • Escherichia coli / genetics
  • Escherichia coli / metabolism*
  • Glucose / genetics
  • Glucose / metabolism*
  • Industrial Microbiology / methods
  • Lactococcus lactis / enzymology
  • Lactococcus lactis / genetics
  • Lactococcus lactis / metabolism*
  • Metabolic Engineering* / methods
  • Propylene Glycols / metabolism*
  • Pyruvate Decarboxylase / genetics
  • Pyruvate Decarboxylase / metabolism
  • Zymomonas / enzymology
  • Zymomonas / genetics
  • Zymomonas / metabolism*

Substances

  • Propylene Glycols
  • 1,3-propanediol
  • Pyruvate Decarboxylase
  • Glucose