Gene manipulation in liver ductal organoids by optimized recombinant adeno-associated virus vectors

J Biol Chem. 2019 Sep 20;294(38):14096-14104. doi: 10.1074/jbc.RA119.008616. Epub 2019 Jul 31.

Abstract

Understanding the mechanism of how liver ductal cells (cholangiocytes) differentiate into hepatocytes would permit liver-regenerative medicine. Emerging liver ductal organoids provide an ex vivo system to investigate cholangiocyte-to-hepatocyte differentiation. However, as current gene manipulation methods require organoid dissociation into single cells and have only low efficiency, it is difficult to dissect specific gene functions in these organoids. Here we developed the adeno-associated virus (AAV) vector AAV-DJ as a powerful tool to transduce mouse and human liver ductal organoids. Via AAV-DJ-mediated up- or down-regulation of target genes, we successfully manipulated cholangiocyte-to-hepatocyte differentiation. We induced differentiation by overexpressing the hepatocyte-specifying regulator hepatocyte nuclear factor 4α (HNF4α) and blocked differentiation by stimulating Notch signaling or interfering with Smad signaling. Further screening for transcriptional factors critical for cholangiocyte-to-hepatocyte differentiation identified HOP homeobox (HOPX), T-box 15 (TBX15), and transcription factor CP2-like 1 (TFCP2L1) as master regulators. We conclude that this highly efficient and convenient gene manipulation system we developed could facilitate investigation into genes involved in cell lineage transitions and enable application of engineered organoids in regenerative medicine.

Keywords: adeno-associated virus (AAV) vector; cholangiocyte-to-hepatocyte differentiation; differentiation; functional screening; gene manipulation; gene therapy; hepatocyte; liver; liver ductal organoid; signaling.

Publication types

  • Research Support, Non-U.S. Gov't

MeSH terms

  • Animals
  • Cell Differentiation / genetics*
  • Cell Lineage
  • Dependovirus / genetics
  • Gene Expression Regulation / genetics
  • Genetic Engineering / methods*
  • Hepatic Duct, Common / cytology
  • Hepatocyte Nuclear Factor 4 / genetics
  • Hepatocyte Nuclear Factor 4 / metabolism
  • Hepatocytes / cytology*
  • Humans
  • Liver / cytology
  • Mice
  • Mice, Inbred C57BL
  • Organoids / cytology
  • Signal Transduction
  • Transcription Factors

Substances

  • Hepatocyte Nuclear Factor 4
  • Transcription Factors