Variants at potential loci associated with Sjogren's syndrome in Koreans: A genetic association study

Clin Immunol. 2019 Oct:207:79-86. doi: 10.1016/j.clim.2019.07.010. Epub 2019 Jul 23.

Abstract

Sjogren's syndrome (SS), a chronic autoimmune disease, typically causes or involves inflammation in the salivary and lacrimal glands. Although recent genetic association studies have contributed to the discovery of SS susceptible genes, few studies have reported on the Korean population. Here, we did a genetic association study of SS in Korean patients using whole-exome sequencing data of 15 patients and 100 healthy controls. In addition to confirming previously described SS susceptibility loci MSH5 (p = 1.67 × 10-5) and RELN (p = 4.91 × 10-6), we also validated PRAMEF13 (p = 2.28 × 10-5), TARBP1 (p = 1.87 × 10-5), UGT2B28 (p = 1.33 × 10-5), TRBV5-6 (p = 2.27 × 10-5) and NAPB (p = 3.73 × 10-5) as novel susceptibility loci for SS. Furthermore, we identified UGT2B28, TARBP1 and PRAMEF13 as associated with human immune function. These findings may provide useful insight into to the pathways and pathogenesis contributing to SS susceptibility in the Korean population.

Keywords: Biomarker; Genetic association study; Korean population; Sjogren's syndrome; Susceptibility loci; Whole exome sequencing.

Publication types

  • Research Support, Non-U.S. Gov't

MeSH terms

  • Aged
  • Asian People*
  • Female
  • Genetic Predisposition to Disease*
  • Humans
  • Middle Aged
  • Polymorphism, Single Nucleotide*
  • Reelin Protein
  • Republic of Korea / epidemiology
  • Sjogren's Syndrome / epidemiology*
  • Sjogren's Syndrome / genetics*