Transcriptomic and proteomic profiling revealed global changes in Streptococcus thermophilus during pH-controlled batch fermentations

J Microbiol. 2019 Sep;57(9):769-780. doi: 10.1007/s12275-019-8604-y. Epub 2019 Jun 14.

Abstract

Understanding global changes of physiological processes at the molecular level during the growth of Streptococcus thermophilus is essential for the rational design of cultivation media and the optimization of bioprocesses. Transcriptomics and proteomics were combined to investigate the global changes at the transcript and protein level during the growth of S. thermophilus. The expression of 1396 genes (FDR ≤ 0.001) and 876 proteins (P < 0.05) changed significantly over time. The most remarkable growth phase dependent changes occurred in the late-lag phase and were related to heterofermentation, glycolysis, peptidoglycan biosynthesis, conversion between amino acids and stress response. The present results could provide theoretical guidance for high-cell-density culture, help design cultivation media, and help attain a high biomass of S. thermophilus.

Keywords: Streptococcus thermophilus; global changes; proteomic; transcriptomic.

MeSH terms

  • Amino Acids / metabolism
  • Bacterial Proteins / genetics*
  • Bacterial Proteins / metabolism
  • Batch Cell Culture Techniques
  • Fermentation
  • Gene Expression Profiling
  • Hydrogen-Ion Concentration
  • Proteomics
  • Streptococcus thermophilus / genetics*
  • Streptococcus thermophilus / growth & development
  • Streptococcus thermophilus / metabolism*
  • Transcriptome*

Substances

  • Amino Acids
  • Bacterial Proteins