Riboswitch distribution, structure, and function in bacteria

Gene. 2019 Aug 5:708:38-48. doi: 10.1016/j.gene.2019.05.036. Epub 2019 May 22.

Abstract

Riboswitches are gene control elements that directly bind to specific ligands to regulate gene expression without the need for proteins. They are found in all three domains of life, including Bacteria, Archaea, and Eukaryota. Riboswitches are mostly spread in bacteria and archaea. In this paper, we discuss the general distribution, structure, and function of 28 different riboswitch classes as we focus our attention on riboswitches in bacteria. Bacterial riboswitches regulate gene expression by four distinct mechanisms. They regulate the expression of a limited number of genes. However, most of these genes are responsible for the synthesis of essential metabolites without which the cell cannot function. Therefore, riboswitch distribution is also important for antibacterial drug development.

Keywords: Aptamers; Genomic analysis; Riboswitch control of gene expression; Riboswitch distribution; Riboswitches; Ribozymes.

Publication types

  • Review

MeSH terms

  • Anti-Bacterial Agents / pharmacology
  • Anti-Bacterial Agents / therapeutic use
  • Bacteria / drug effects
  • Bacteria / genetics*
  • Bacterial Infections / drug therapy
  • Bacterial Infections / microbiology
  • Drug Development
  • Gene Expression Regulation, Bacterial / drug effects
  • Gene Expression Regulation, Bacterial / genetics*
  • RNA, Bacterial / antagonists & inhibitors
  • RNA, Bacterial / genetics*
  • Riboswitch / drug effects
  • Riboswitch / genetics*

Substances

  • Anti-Bacterial Agents
  • RNA, Bacterial
  • Riboswitch