Genomic Observations of a Rare/Pathogenic SMAD3 Variant in Loeys⁻Dietz Syndrome 3 Confirmed by Protein Informatics and Structural Investigations

Medicina (Kaunas). 2019 May 15;55(5):137. doi: 10.3390/medicina55050137.

Abstract

Background and objectives: Loeys-Dietz syndrome 3, also known as aneurysms--osteoarthritis syndrome, is an autosomal dominant genetic connective tissue disease caused by pathogenic variants in SMAD3, a transcription factor involved in TGF-β signaling. This disorder is characterized by early-onset osteoarthritis and arterial aneurysms. Common features include scoliosis, uvula abnormalities, striae, and velvety skin. Materials and Methods: The pathogenicity of a variant of uncertain significance in the SMAD3 gene was evaluated (variant c.220C > T) through personalized protein informatics and molecular studies. Results: The case of a 44-year-old male, who was originally presumed to have Marfan syndrome, is presented. An expanded gene panel determined the probable cause to be a variant in SMAD3, c.220C > T (p.R74W). His case was complicated by a history of stroke, but his phenotype was otherwise characteristic for Loeys-Dietz syndrome 3. Conclusion: This case emphasizes the importance of comprehensive genetic testing to evaluate patients for connective tissue disorders, as well as the potential benefit of utilizing a protein informatics platform for the assessment of variant pathogenicity.

Keywords: Loeys–Dietz syndrome 3 (LDS3); SMA- and MAD-related protein 3 (SMAD3); case report; molecular genomics; pathogenicity; protein informatics.

MeSH terms

  • Adult
  • Genomics / methods
  • Humans
  • Loeys-Dietz Syndrome / blood
  • Loeys-Dietz Syndrome / genetics*
  • Male
  • Phenotype
  • Smad3 Protein / analysis*
  • Smad3 Protein / blood
  • Smad3 Protein / genetics*

Substances

  • SMAD3 protein, human
  • Smad3 Protein