An Introduction to Bayesian Multilevel Models Using brms: A Case Study of Gender Effects on Vowel Variability in Standard Indonesian

J Speech Lang Hear Res. 2019 May 21;62(5):1225-1242. doi: 10.1044/2018_JSLHR-S-18-0006.

Abstract

Purpose Bayesian multilevel models are increasingly used to overcome the limitations of frequentist approaches in the analysis of complex structured data. This tutorial introduces Bayesian multilevel modeling for the specific analysis of speech data, using the brms package developed in R. Method In this tutorial, we provide a practical introduction to Bayesian multilevel modeling by reanalyzing a phonetic data set containing formant (F1 and F2) values for 5 vowels of standard Indonesian (ISO 639-3:ind), as spoken by 8 speakers (4 females and 4 males), with several repetitions of each vowel. Results We first give an introductory overview of the Bayesian framework and multilevel modeling. We then show how Bayesian multilevel models can be fitted using the probabilistic programming language Stan and the R package brms, which provides an intuitive formula syntax. Conclusions Through this tutorial, we demonstrate some of the advantages of the Bayesian framework for statistical modeling and provide a detailed case study, with complete source code for full reproducibility of the analyses ( https://osf.io/dpzcb /). Supplemental Material https://doi.org/10.23641/asha.7973822.

Publication types

  • Research Support, Non-U.S. Gov't

MeSH terms

  • Bayes Theorem
  • Female
  • Humans
  • Indonesia
  • Language*
  • Male
  • Multilevel Analysis
  • Phonation*
  • Phonetics
  • Sex Characteristics
  • Speech*