Flexible-to-rigid transition is central for substrate transport in the ABC transporter BmrA from Bacillus subtilis

Commun Biol. 2019 Apr 29:2:149. doi: 10.1038/s42003-019-0390-x. eCollection 2019.

Abstract

ATP-binding-cassette (ABC) transporters are molecular pumps that translocate molecules across the cell membrane by switching between inward-facing and outward-facing states. To obtain a detailed understanding of their mechanism remains a challenge to structural biology, as these proteins are notoriously difficult to study at the molecular level in their active, membrane-inserted form. Here we use solid-state NMR to investigate the multidrug ABC transporter BmrA reconstituted in lipids. We identify the chemical-shift differences between the inward-facing, and outward-facing state induced by ATP:Mg2+:Vi addition. Analysis of an X-loop mutant, for which we show that ATPase and transport activities are uncoupled, reveals an incomplete transition to the outward-facing state upon ATP:Mg2+:Vi addition, notably lacking the decrease in dynamics of a defined set of residues observed in wild-type BmrA. This suggests that this stiffening is required for an efficient transmission of the conformational changes to allow proper transport of substrate by the pump.

Keywords: Bacteria; Solid-state NMR.

Publication types

  • Research Support, Non-U.S. Gov't

MeSH terms

  • ATP-Binding Cassette Transporters / metabolism*
  • Adenosine Triphosphatases / metabolism
  • Adenosine Triphosphate / metabolism
  • Bacillus subtilis / metabolism*
  • Bacterial Proteins / metabolism*
  • Binding Sites
  • Cell Membrane / metabolism
  • Drug Resistance, Multiple
  • Hydrolysis
  • Magnesium / metabolism
  • Magnetic Resonance Spectroscopy / methods
  • Protein Conformation

Substances

  • ATP-Binding Cassette Transporters
  • Bacterial Proteins
  • Adenosine Triphosphate
  • Adenosine Triphosphatases
  • Magnesium