Human keratin 1/10-1B tetramer structures reveal a knob-pocket mechanism in intermediate filament assembly

EMBO J. 2019 Jun 3;38(11):e100741. doi: 10.15252/embj.2018100741. Epub 2019 Apr 29.

Abstract

To characterize keratin intermediate filament assembly mechanisms at atomic resolution, we determined the crystal structure of wild-type human keratin-1/keratin-10 helix 1B heterotetramer at 3.0 Å resolution. It revealed biochemical determinants for the A11 mode of axial alignment in keratin filaments. Four regions on a hydrophobic face of the K1/K10-1B heterodimer dictated tetramer assembly: the N-terminal hydrophobic pocket (defined by L227K1, Y230K1, F231K1, and F234K1), the K10 hydrophobic stripe, K1 interaction residues, and the C-terminal anchoring knob (formed by F314K1 and L318K1). Mutation of both knob residues to alanine disrupted keratin 1B tetramer and full-length filament assembly. Individual knob residue mutant F314AK1, but not L318AK1, abolished 1B tetramer formation. The K1-1B knob/pocket mechanism is conserved across keratins and many non-keratin intermediate filaments. To demonstrate how pathogenic mutations cause skin disease by altering filament assembly, we additionally determined the 2.39 Å structure of K1/10-1B containing a S233LK1 mutation linked to epidermolytic palmoplantar keratoderma. Light scattering and circular dichroism measurements demonstrated enhanced aggregation of K1S233L/K10-1B in solution without affecting secondary structure. The K1S233L/K10-1B octamer structure revealed S233LK1 causes aberrant hydrophobic interactions between 1B tetramers.

Keywords: intermediate filament; keratin; skin disease; structure; vimentin.

Publication types

  • Research Support, N.I.H., Extramural
  • Research Support, Non-U.S. Gov't

MeSH terms

  • Amino Acid Substitution
  • Circular Dichroism
  • Crystallography, X-Ray
  • Cytoskeleton / chemistry
  • Cytoskeleton / metabolism
  • Dynamic Light Scattering
  • Humans
  • Hydrophobic and Hydrophilic Interactions
  • Intermediate Filament Proteins / chemistry*
  • Intermediate Filament Proteins / genetics
  • Intermediate Filament Proteins / metabolism*
  • Keratin-1* / chemistry
  • Keratin-1* / genetics
  • Keratin-1* / metabolism
  • Keratin-10* / chemistry
  • Keratin-10* / genetics
  • Keratin-10* / metabolism
  • Models, Molecular
  • Mutation, Missense
  • Protein Folding
  • Protein Interaction Domains and Motifs* / genetics
  • Protein Multimerization / physiology*
  • Protein Structure, Quaternary
  • Protein Structure, Secondary
  • Skin Diseases / genetics
  • Skin Diseases / metabolism
  • Skin Diseases / pathology

Substances

  • Intermediate Filament Proteins
  • KRT10 protein, human
  • Keratin-1
  • Keratin-10

Associated data

  • PDB/6EC0
  • PDB/6E2J