Quantitative Analysis of Nuclear Lamins Imaged by Super-Resolution Light Microscopy

Cells. 2019 Apr 18;8(4):361. doi: 10.3390/cells8040361.

Abstract

The nuclear lamina consists of a dense fibrous meshwork of nuclear lamins, Type V intermediate filaments, and is ~14 nm thick according to recent cryo-electron tomography studies. Recent advances in light microscopy have extended the resolution to a scale allowing for the fine structure of the lamina to be imaged in the context of the whole nucleus. We review quantitative approaches to analyze the imaging data of the nuclear lamina as acquired by structured illumination microscopy (SIM) and single molecule localization microscopy (SMLM), as well as the requisite cell preparation techniques. In particular, we discuss the application of steerable filters and graph-based methods to segment the structure of the four mammalian lamin isoforms (A, C, B1, and B2) and extract quantitative information.

Keywords: computational geometry; delaunay triangulation; lamins; single molecule localization microscopy; steerable filters; structured illumination microscopy; voronoi tessellation.

Publication types

  • Research Support, N.I.H., Extramural
  • Research Support, Non-U.S. Gov't
  • Review

MeSH terms

  • Animals
  • Cell Nucleus / metabolism
  • Electron Microscope Tomography / methods
  • Humans
  • Intermediate Filament Proteins / analysis
  • Intermediate Filaments / chemistry
  • Intermediate Filaments / physiology
  • Lamin Type A / analysis
  • Lamin Type B / analysis
  • Lamins / chemistry
  • Lamins / physiology
  • Nuclear Lamina / chemistry*
  • Nuclear Lamina / physiology
  • Nuclear Lamina / ultrastructure*
  • Protein Isoforms / analysis

Substances

  • Intermediate Filament Proteins
  • Lamin Type A
  • Lamin Type B
  • Lamins
  • Protein Isoforms