Ammonothermal Synthesis, X-Ray and Time-of-Flight Neutron Crystal-Structure Determination, and Vibrational Properties of Barium Guanidinate, Ba(CN3H4)2

ChemistryOpen. 2019 Mar 14;8(3):327-332. doi: 10.1002/open.201900068. eCollection 2019 Mar.

Abstract

We report the crystal structure of Ba(CN3H4)2 as synthesized from liquid ammonia. Structure solution based on X-ray diffraction data suffers from a severe pseudo-tetragonal problem due to extreme scattering contrast, so the true monoclinic symmetry is detectable only from neutron powder diffraction patterns, and structure solution and refinement was greatly aided by density-functional theory. The symmetry lowering is due to slight deviations of the guanidinate anion from the mirror plane in space group P 4 b2, a necessity of hydrogen bonding. At 300 K, barium guanidinate crystallizes in P21/c with a=6.26439(2) Å, b=16.58527(5) Å, c=6.25960(2) Å, and a monoclinic angle of β=90.000(1)°. To improve the data-to-parameter ratio, anisotropic displacement parameters from first-principles theory were incorporated in the neutron refinement. Given the correct structural model, the positional parameters of the heavy atoms were also refinable from X-ray diffraction of a twinned crystal. The two independent guanidinate anions adopt the all-trans- and the anti-shape. The Ba cation is coordinated by eight imino nitrogens in a square antiprism with Ba-N contacts between 2.81 and 3.04 Å. The IR and Raman spectra of barium guanidinate were compared with DFT-calculated phonon spectra to identify the vibrational modes.

Keywords: X-ray diffraction; barium; density-functional theory; neutron diffraction; vibrational spectroscopy.