Multi-metal Restriction by Calprotectin Impacts De Novo Flavin Biosynthesis in Acinetobacter baumannii

Cell Chem Biol. 2019 May 16;26(5):745-755.e7. doi: 10.1016/j.chembiol.2019.02.011. Epub 2019 Mar 21.

Abstract

Calprotectin (CP) inhibits bacterial viability through extracellular chelation of transition metals. However, how CP influences general metabolism remains largely unexplored. We show here that CP restricts bioavailable Zn and Fe to the pathogen Acinetobacter baumannii, inducing an extensive multi-metal perturbation of cellular physiology. Proteomics reveals severe metal starvation, and a strain lacking the candidate ZnII metallochaperone ZigA possesses altered cellular abundance of multiple essential Zn-dependent enzymes and enzymes in de novo flavin biosynthesis. The ΔzigA strain exhibits decreased cellular flavin levels during metal starvation. Flavin mononucleotide provides regulation of this biosynthesis pathway, via a 3,4-dihydroxy-2-butanone 4-phosphate synthase (RibB) fusion protein, RibBX, and authentic RibB. We propose that RibBX ensures flavin sufficiency under CP-induced Fe limitation, allowing flavodoxins to substitute for Fe-ferredoxins as cell reductants. These studies elucidate adaptation to nutritional immunity and define an intersection between metallostasis and cellular metabolism in A. baumannii.

Keywords: 3,4-dihydroxy-2-butanone 4-phosphate synthase (DHBPS); Acinetobacter baumannii; antimicrobial activity; calprotectin; host-microbe interaction; nutritional immunity; riboflavin biosynthesis; transition metal homeostasis.

Publication types

  • Research Support, N.I.H., Extramural
  • Research Support, U.S. Gov't, Non-P.H.S.

MeSH terms

  • Acinetobacter baumannii / metabolism*
  • Bacterial Proteins / metabolism
  • Chromatography, High Pressure Liquid
  • Flavins / biosynthesis*
  • Heat-Shock Proteins / metabolism
  • Iron / chemistry
  • Iron / metabolism
  • Leukocyte L1 Antigen Complex / chemistry*
  • Leukocyte L1 Antigen Complex / pharmacology
  • Metallochaperones / genetics
  • Metallochaperones / metabolism
  • Proteome / analysis
  • Proteome / drug effects
  • Tandem Mass Spectrometry
  • Zinc / chemistry*
  • Zinc / metabolism

Substances

  • Bacterial Proteins
  • Flavins
  • Heat-Shock Proteins
  • Leukocyte L1 Antigen Complex
  • Metallochaperones
  • Proteome
  • Iron
  • Zinc