Altered expression profile of circular RNAs in conjunctival melanoma

Epigenomics. 2019 May;11(7):787-804. doi: 10.2217/epi-2019-0029. Epub 2019 Mar 20.

Abstract

Aim: We aimed to explore the roles of circular RNA (circRNA) in conjunctival melanoma. Materials & methods: The altered circRNAs were identified by RNA sequencing. The function of one circRNA, circMTUS1, was explored by several experiments in conjunctival melanoma. Bioinformatic analyses and an RNA immunoprecipitation assay were performed to further study the downstream mechanism of circMTUS1. Results: We identified 9300 different circRNAs in conjunctival melanoma tissues compared with adjacent normal tissues. CircMTUS1 was upregulated in conjunctival melanoma. Silencing of circMTUS1 inhibited conjunctival melanoma proliferation in vitro and in vivo. CircMTUS1 may serve as an oncogene by binding to hsa-miR-622 and hsa-miR-1208 to regulate several tumor-related pathways. Conclusion: We demonstrated that circMTUS1 may serve as an oncogene to promote tumor proliferation.

Keywords: bioinformatics; circMTUS1; circular RNA; conjunctival melanoma.

Publication types

  • Research Support, Non-U.S. Gov't

MeSH terms

  • Animals
  • Cell Line, Tumor
  • Cell Proliferation
  • Exons
  • Humans
  • Male
  • Melanoma / drug therapy
  • Melanoma / genetics
  • Melanoma / pathology*
  • Mice
  • Mice, Inbred NOD
  • Mice, SCID
  • MicroRNAs / metabolism
  • Protein Interaction Maps
  • RNA Interference
  • RNA, Circular / antagonists & inhibitors
  • RNA, Circular / genetics
  • RNA, Circular / metabolism*
  • RNA, Small Interfering / metabolism
  • RNA, Small Interfering / therapeutic use
  • Transplantation, Heterologous
  • Tumor Suppressor Proteins / genetics
  • Up-Regulation*

Substances

  • MIRN622 microRNA, human
  • MTUS1 protein, human
  • MicroRNAs
  • RNA, Circular
  • RNA, Small Interfering
  • Tumor Suppressor Proteins