Arginine-95 is important for recruiting superoxide to the active site of the FerB flavoenzyme of Paracoccus denitrificans

FEBS Lett. 2019 Apr;593(7):697-702. doi: 10.1002/1873-3468.13359. Epub 2019 Mar 23.

Abstract

Ferric reductase B (FerB) is a flavin mononucleotide (FMN)-containing NAD(P)H:acceptor oxidoreductase structurally close to the Gluconacetobacter hansenii chromate reductase (ChrR). The crystal structure of ChrR was previously determined with a chloride bound proximal to FMN in the vicinity of Arg101, and the authors suggested that the anionic electron acceptors, chromate and uranyl tricarbonate, bind similarly. Here, we identify the corresponding arginine residue in FerB (Arg95) as being important for the reaction of FerB with superoxide. Four mutants at position 95 were prepared and found kinetically to have impaired capacity for superoxide binding. Stopped-flow data for the flavin cofactor showed that the oxidative step is rate limiting for catalytic turnover. The findings are consistent with a role for FerB as a superoxide scavenging contributor.

Keywords: Paracoccus denitrificans; antioxidant enzyme; chromate reductase; flavoprotein; superoxide reductase.

Publication types

  • Research Support, Non-U.S. Gov't

MeSH terms

  • Amino Acid Sequence / genetics
  • Arginine / genetics
  • Catalytic Domain / genetics
  • Crystallography, X-Ray
  • FMN Reductase / chemistry*
  • FMN Reductase / genetics
  • Flavin Mononucleotide / chemistry
  • Flavin Mononucleotide / genetics
  • Flavins / genetics*
  • Flavins / metabolism
  • Kinetics
  • Oxidation-Reduction
  • Oxidoreductases / chemistry
  • Oxidoreductases / genetics
  • Paracoccus denitrificans / chemistry
  • Paracoccus denitrificans / enzymology
  • Protein Conformation*
  • Superoxides / metabolism*

Substances

  • Flavins
  • Superoxides
  • Flavin Mononucleotide
  • Arginine
  • Oxidoreductases
  • FMN Reductase
  • ferric citrate iron reductase
  • chromate reductase