Differences in biochemical properties of two 5'-nucleotidases from deep- and shallow-sea Shewanella species under various harsh conditions

Biosci Biotechnol Biochem. 2019 Jun;83(6):1085-1093. doi: 10.1080/09168451.2019.1578641. Epub 2019 Feb 14.

Abstract

Deep-sea Shewanella violacea 5'-nucleotidase (SVNTase) activity exhibited higher NaCl tolerance than that of a shallow-sea Shewanella amazonensis homologue (SANTase), the sequence identity between them being 70.4%. Here, SVNTase exhibited higher activity than SANTase with various inorganic salts, similar to the difference in their NaCl tolerance. In contrast, SVNTase activity decreased with various organic solvents, while SANTase activity was retained with the same concentrations of the solvents. Therefore, SVNTase is more robust than SANTase with inorganic salts, but more vulnerable with organic solvents. As to protein stability, SANTase was more stable against organic solvents and heat than SVNTase, which correlated with the differences in their enzymatic activities. We also found that SANTase retained higher activity for three weeks than SVNTase did in the presence of glycerol. These findings will facilitate further application of these enzymes as appropriate biological catalysts under various harsh conditions. Abbreviations: NTase: 5'-nucleotidase; SANTase: Shewanella amazonensis 5'-nucleotidase; SVNTase: Shewanella violacea 5'-nucleotidase; CD: circular dichroism.

Keywords: 5′-nucleotidase; ATPase activity; Inorganic salt; organic solvent.

MeSH terms

  • 5'-Nucleotidase / chemistry
  • 5'-Nucleotidase / metabolism*
  • Adenosine Triphosphatases / metabolism
  • Biocatalysis
  • Catalytic Domain
  • Circular Dichroism
  • Enzyme Stability
  • Hot Temperature
  • Inorganic Chemicals / chemistry
  • Organic Chemicals / chemistry
  • Protein Conformation
  • Salt Tolerance
  • Seawater / microbiology*
  • Shewanella / enzymology*
  • Shewanella / physiology
  • Solvents / chemistry

Substances

  • Inorganic Chemicals
  • Organic Chemicals
  • Solvents
  • 5'-Nucleotidase
  • Adenosine Triphosphatases