Structural studies on bacterial system used in the recognition and uptake of the macromolecule alginate

Biosci Biotechnol Biochem. 2019 May;83(5):794-802. doi: 10.1080/09168451.2019.1578642. Epub 2019 Feb 11.

Abstract

Alginate is an acidic heteropolysaccharide produced by brown seaweed and certain kinds of bacteria. The cells of Sphingomonas sp. strain A1, a gram-negative bacterium, have several alginate-degrading enzymes in their cytoplasm and efficiently utilize this polymer for their growth. Sphingomonas sp. strain A1 cells can directly incorporate alginate into their cytoplasm through a transport system consisting of a "pit" on their cell surface, substrate-binding proteins in their periplasm, and an ATP-binding cassette transporter in their inner membrane. This review deals with the structural and functional aspects of bacterial systems necessary for the recognition and uptake of alginate.

Keywords: ABC transporter; Sphingomonad; X-ray crystallography; alginate; flagella.

Publication types

  • Review

MeSH terms

  • ATP-Binding Cassette Transporters / metabolism
  • Alginates / chemistry
  • Alginates / metabolism*
  • Amino Acid Sequence
  • Bacterial Proteins / chemistry
  • Bacterial Proteins / metabolism*
  • Biological Transport
  • Crystallography, X-Ray
  • Cytoplasm / enzymology
  • Metals / metabolism
  • Periplasm / metabolism
  • Protein Binding
  • Protein Conformation
  • Receptors, Cell Surface / chemistry
  • Receptors, Cell Surface / metabolism
  • Sequence Homology, Amino Acid
  • Sphingomonas / enzymology
  • Sphingomonas / metabolism*

Substances

  • ATP-Binding Cassette Transporters
  • Alginates
  • Bacterial Proteins
  • Metals
  • Receptors, Cell Surface