In Vivo Characterization of Phosphotransferase-Encoding Genes istP and forP as Interchangeable Launchers of the C3',4'-Dideoxygenation Biosynthetic Pathway of 1,4-Diaminocyclitol Antibiotics

J Microbiol Biotechnol. 2019 Mar 28;29(3):367-372. doi: 10.4014/jmb.1809.09021.

Abstract

Deactivation of aminoglycosides by their modifying enzymes, including a number of aminoglycoside O-phosphotransferases, is the most ubiquitous resistance mechanism in aminoglycoside-resistant pathogens. Nonetheless, in a couple of biosynthetic pathways for gentamicins, fortimicins, and istamycins, phosphorylation of aminoglycosides seems to be a unique and initial step for the creation of a natural defensive structural feature such as a 3',4'- dideoxy scaffold. Our aim was to elucidate the biochemical details on the beginning of these C3',4'-dideoxygenation biosynthetic steps for aminoglycosides. The biosynthesis of istamycins must surely involve these 3',4'-didehydroxylation steps, but much less has been reported in terms of characterization of istamycin biosynthetic genes, especially about the phosphotransferase-encoding gene. In the disruption and complementation experiments pointing to a putative gene, istP, in the genome of wild-type Streptomyces tenjimariensis, the function of the istP gene was proved here to be a phosphotransferase. Next, an in-frame deletion of a known phosphotransferase-encoding gene forP from the genome of wild-type Micromonospora olivasterospora resulted in the appearance of a hitherto unidentified fortimicin shunt product, namely 3-O-methyl-FOR-KK1, whereas complementation of forP restored the natural fortimicin metabolite profiles. The bilateral complementation of an istP gene (or forP) in the ΔforP mutant ( or ΔistP mutant strain) successfully restored the biosynthesis of 3',4'- dideoxy fortimicins and istamycins , thus clearly indicating that they are interchangeable launchers of the biosynthesis of 3',4'-dideoxy types of 1,4-diaminocyclitol antibiotics.

Keywords: 1-O-methyl-FOR-KK1; Aminoglycoside; fortimicin; istP; istamycin.

MeSH terms

  • Amino Acid Sequence
  • Aminoglycosides / biosynthesis*
  • Aminoglycosides / genetics
  • Anti-Bacterial Agents / biosynthesis*
  • Bacterial Proteins / genetics
  • Bacterial Proteins / metabolism
  • Biosynthetic Pathways / genetics*
  • Biosynthetic Pathways / physiology*
  • Deoxyguanine Nucleotides / biosynthesis
  • Deoxyguanine Nucleotides / genetics
  • Dideoxynucleotides / biosynthesis
  • Dideoxynucleotides / genetics
  • Genes, Bacterial / genetics*
  • Gentamicins / biosynthesis
  • Micromonospora / genetics
  • Micromonospora / metabolism
  • Phosphotransferases / genetics*
  • Sequence Alignment
  • Streptomyces / genetics
  • Streptomyces / metabolism

Substances

  • Aminoglycosides
  • Anti-Bacterial Agents
  • Bacterial Proteins
  • Deoxyguanine Nucleotides
  • Dideoxynucleotides
  • Gentamicins
  • 2',3'-dideoxyguanosine 5'-triphosphate
  • fortimicins
  • istamycins
  • Phosphotransferases