Draft Genome Sequence of Pediatric Otitis Media Isolate Streptococcus pneumoniae Strain EF3030, Which Forms In Vitro Biofilms That Closely Mimic In Vivo Biofilms

Edgar J Scott 2nd; Nicole R Luke-Marshall; Anthony A Campagnari; David W Dyer

doi:10.1128/MRA.01114-18

Draft Genome Sequence of Pediatric Otitis Media Isolate Streptococcus pneumoniae Strain EF3030, Which Forms In Vitro Biofilms That Closely Mimic In Vivo Biofilms

Microbiol Resour Announc. 2019 Jan 10;8(2):e01114-18. doi: 10.1128/MRA.01114-18. eCollection 2019 Jan.

Authors

Edgar J Scott 2nd¹, Nicole R Luke-Marshall², Anthony A Campagnari², David W Dyer¹

Affiliations

¹ Department of Microbiology and Immunology, University of Oklahoma Health Sciences Center, Oklahoma City, Oklahoma, USA.
² Department of Microbiology and Immunology, State University of New York at Buffalo, Buffalo, New York, USA.

Abstract

Here, we report the draft genome sequence of Streptococcus pneumoniae EF3030, a pediatric otitis media isolate active in biofilm assays of epithelial colonization. The final draft assembly included 2,209,198 bp; the annotation predicted 2,120 coding DNA sequences (CDSs), 4 complete rRNA operons, 58 tRNAs, 3 noncoding RNAs (ncRNAs), and 199 pseudogenes.

Grants and funding

P20 GM103447/GM/NIGMS NIH HHS/United States