Using Chromatin Architecture to Understand the Genetics and Transcriptomics of Juvenile Idiopathic Arthritis

Front Immunol. 2018 Dec 14:9:2964. doi: 10.3389/fimmu.2018.02964. eCollection 2018.

Abstract

The presence of abnormal gene expression signatures is a well-described feature of the oligoarticular and polyarticular forms of juvenile idiopathic arthritis. In this review, we discuss how new insights into genetic risk for JIA and the three dimensional architecture of the genome may be used to develop a better understanding of the mechanisms driving these gene expression patterns.

Keywords: enhancer; genetics; juvenile idiopathic arthritis (JIA); non-coding genome; topically associated domains.

Publication types

  • Research Support, N.I.H., Extramural
  • Research Support, Non-U.S. Gov't
  • Review

MeSH terms

  • Arthritis, Juvenile / genetics*
  • Arthritis, Juvenile / pathology
  • Chromatin / genetics*
  • Gene Frequency
  • Genetic Association Studies / methods
  • Genetic Predisposition to Disease / genetics*
  • Genome-Wide Association Study / methods*
  • Humans
  • Polymorphism, Single Nucleotide
  • Transcriptome / genetics*

Substances

  • Chromatin