A database-driven approach identifies additional diterpene synthase activities in the mint family (Lamiaceae)

J Biol Chem. 2019 Jan 25;294(4):1349-1362. doi: 10.1074/jbc.RA118.006025. Epub 2018 Nov 29.

Abstract

Members of the mint family (Lamiaceae) accumulate a wide variety of industrially and medicinally relevant diterpenes. We recently sequenced leaf transcriptomes from 48 phylogenetically diverse Lamiaceae species. Here, we summarize the available chemotaxonomic and enzyme activity data for diterpene synthases (diTPSs) in the Lamiaceae and leverage the new transcriptomes to explore the diTPS sequence and functional space. Candidate genes were selected with an intent to evenly sample the sequence homology space and to focus on species in which diTPS transcripts were found, yet from which no diterpene structures have been previously reported. We functionally characterized nine class II diTPSs and 10 class I diTPSs from 11 distinct plant species and found five class II activities, including two novel activities, as well as a spectrum of class I activities. Among the class II diTPSs, we identified a neo-cleroda-4(18),13E-dienyl diphosphate synthase from Ajuga reptans, catalyzing the likely first step in the biosynthesis of a variety of insect-antifeedant compounds. Among the class I diTPSs was a palustradiene synthase from Origanum majorana, leading to the discovery of specialized diterpenes in that species. Our results provide insights into the diversification of diterpene biosynthesis in the mint family and establish a comprehensive foundation for continued investigation of diterpene biosynthesis in the Lamiaceae.

Keywords: Lamiaceae; biosynthesis; chemotaxonomy; diterpene synthase; enzymes; phytochemistry; plant biochemistry; secondary metabolism; terpenoid; transcriptomics.

Publication types

  • Research Support, Non-U.S. Gov't
  • Research Support, U.S. Gov't, Non-P.H.S.

MeSH terms

  • Alkyl and Aryl Transferases / metabolism*
  • Databases, Pharmaceutical*
  • Diterpenes / metabolism*
  • Gene Expression Regulation, Plant
  • Lamiaceae / enzymology*
  • Lamiaceae / genetics
  • Lamiaceae / growth & development
  • Phylogeny
  • Plant Leaves / genetics
  • Plant Leaves / growth & development
  • Plant Leaves / metabolism*
  • Plant Proteins / genetics
  • Plant Proteins / metabolism*

Substances

  • Diterpenes
  • Plant Proteins
  • Alkyl and Aryl Transferases