Multilayered gene control drives timely exit from the stem cell state in uncommitted progenitors during Drosophila asymmetric neural stem cell division

Genes Dev. 2018 Dec 1;32(23-24):1550-1561. doi: 10.1101/gad.320333.118. Epub 2018 Nov 21.

Abstract

Self-renewal genes maintain stem cells in an undifferentiated state by preventing the commitment to differentiate. Robust inactivation of self-renewal gene activity following asymmetric stem cell division allows uncommitted stem cell progeny to exit from an undifferentiated state and initiate the commitment to differentiate. Nonetheless, how self-renewal gene activity at mRNA and protein levels becomes synchronously terminated in uncommitted stem cell progeny is unclear. We demonstrate that a multilayered gene regulation system terminates self-renewal gene activity at all levels in uncommitted stem cell progeny in the fly neural stem cell lineage. We found that the RNA-binding protein Brain tumor (Brat) targets the transcripts of a self-renewal gene, deadpan (dpn), for decay by recruiting the deadenylation machinery to the 3' untranslated region (UTR). Furthermore, we identified a nuclear protein, Insensible, that complements Cullin-mediated proteolysis to robustly inactivate Dpn activity by limiting the level of active Dpn through protein sequestration. The synergy between post-transcriptional and transcriptional control of self-renewal genes drives timely exit from the stem cell state in uncommitted progenitors. Our proposed multilayered gene regulation system could be broadly applicable to the control of exit from stemness in all stem cell lineages.

Keywords: Notch signaling; asymmetric stem cell division; exit from stemness; neuroblasts; post-translational regulation.

Publication types

  • Research Support, N.I.H., Extramural
  • Research Support, Non-U.S. Gov't

MeSH terms

  • 3' Untranslated Regions / genetics
  • Animals
  • Basic Helix-Loop-Helix Transcription Factors / metabolism
  • Cell Division / genetics*
  • Cell Self Renewal / genetics*
  • Co-Repressor Proteins / metabolism
  • DNA-Binding Proteins / metabolism
  • Drosophila Proteins / metabolism
  • Drosophila melanogaster / cytology
  • Drosophila melanogaster / embryology*
  • Drosophila melanogaster / genetics*
  • Gene Expression Regulation, Developmental / genetics*
  • Gene Silencing
  • Neural Stem Cells / cytology*
  • Nuclear Proteins / metabolism
  • Stem Cells / cytology

Substances

  • 3' Untranslated Regions
  • Basic Helix-Loop-Helix Transcription Factors
  • Co-Repressor Proteins
  • DNA-Binding Proteins
  • Drosophila Proteins
  • Insv protein, Drosophila
  • Nuclear Proteins
  • brat protein, Drosophila
  • Dpn protein, Drosophila