Whole-genome sequence data and analysis of type strains ' Pusillimonas nitritireducens' and ' Pusillimonas subterraneus' isolated from nitrate- and radionuclide-contaminated groundwater in Russia

Denis S Grouzdev; Tatiyana P Tourova; Tamara L Babich; Margarita A Shevchenko; Diyana S Sokolova; Ruslan R Abdullin; Andrey B Poltaraus; Stepan V Toshchakov; Tamara N Nazina

doi:10.1016/j.dib.2018.10.060

Whole-genome sequence data and analysis of type strains ' Pusillimonas nitritireducens' and ' Pusillimonas subterraneus' isolated from nitrate- and radionuclide-contaminated groundwater in Russia

Data Brief. 2018 Oct 25:21:882-887. doi: 10.1016/j.dib.2018.10.060. eCollection 2018 Dec.

Authors

Denis S Grouzdev¹, Tatiyana P Tourova², Tamara L Babich², Margarita A Shevchenko³, Diyana S Sokolova², Ruslan R Abdullin², Andrey B Poltaraus⁴, Stepan V Toshchakov³, Tamara N Nazina^{2

5}

Affiliations

¹ Institute of Bioengineering, Research Center of Biotechnology, Russian Academy of Sciences, Moscow, Russian Federation.
² Winogradsky Institute of Microbiology, Research Center of Biotechnology, Russian Academy of Sciences, Moscow, Russian Federation.
³ Immanuel Kant Baltic Federal University, Kaliningrad, Russian Federation.
⁴ Engelhardt Institute of Molecular Biology, Russian Academy of Sciences, Moscow, Russian Federation.
⁵ V.I. Vernadsky Institute of Geochemistry and Analytical Chemistry of Russian Academу of Sciences, Moscow, Russian Federation.

Abstract

Two strains, 'Pusillimonas nitritireducens' JR1/69-2-13^T and 'Pusillimonas subterraneus' JR1/69-3-13^T, of aerobic, motile, Gram-negative, non-spore-forming, organotrophic, psychrotolerant bacteria were isolated from a sample of nitrate- and radionuclide-contaminated groundwater in Russia. Here we describe the draft genomes of these strains. The sequenced and annotated genome of the strain JR1/69-2-13^T contained 4.3 Mbp with 4108 protein-coding genes. The genome of the strain JR1/69-3-13^T contained 4.5 Mbp with 4260 protein-coding genes. Genome analysis of both strains provides an insight into the genomic basis of their resistance to nitrate, heavy metals and metalloids. The draft genome sequences of strains 'Pusillimonas nitritireducens' JR1/69-2-13^T and 'Pusillimonas subterraneus' JR1/69-3-13^T are available at DDBJ/EMBL/GenBank under the accession nos. https://www.ncbi.nlm.nih.gov/nuccore/PDNV00000000 and https://www.ncbi.nlm.nih.gov/nuccore/PDNW00000000, respectively.

Keywords: Draft genome; Gene prediction; Metal resistance; denitrification; ‘Pusillimonas nitritireducens’; ‘Pusillimonas subterraneus’.