LncRNA NKILA regulates endothelium inflammation by controlling a NF-κB/KLF4 positive feedback loop

J Mol Cell Cardiol. 2019 Jan:126:60-69. doi: 10.1016/j.yjmcc.2018.11.001. Epub 2018 Nov 10.

Abstract

Endothelium inflammation, a key event in vascular pathological process, can lead to endothelial activation and subsequent vascular disorders. Long non-coding RNA NKILA plays an important regulatory role in pro-inflammatory response. However, the underlying molecular basis by which NKILA regulates endothelial inflammation is poorly understood. In this study, we identify NKILA as a critical repressor to protect the endothelium from inflammation. Mechanistically, we show that NKILA is able to positively mediate the expression of KLF4, an anti-inflammatory atheroprotective regulator in endothelial cells (ECs), by a NF-κB-mediated DNA methylation mechanism. Moreover, NF-κB is found to help recruit DNMT3A to the CpG island of KLF4 promoter, facilitating KLF4 promoter DNA methylation and transcriptional repression. More importantly, we find KLF4 can inversely attenuate NF-κB transcriptional activity via establishing a NF-κB/KLF4 positive feedback loop, which is under the control of NKILA. Hence, sustained endothelium inflammation will occur, once the NKILA becomes dysfunctional. These studies revealed that NKILA can function as a vital regulator to protect the endothelium from inflammatory lesions and related vascular diseases.

Keywords: Endothelium inflammation; Feedback loop; Methylation; NKILA.

Publication types

  • Research Support, Non-U.S. Gov't

MeSH terms

  • DNA (Cytosine-5-)-Methyltransferases
  • DNA Methylation / genetics
  • DNA Methyltransferase 3A
  • Endothelium, Vascular / pathology*
  • Feedback, Physiological*
  • Gene Expression Regulation
  • HEK293 Cells
  • Human Umbilical Vein Endothelial Cells / metabolism
  • Humans
  • Inflammation / genetics*
  • Kruppel-Like Factor 4
  • Kruppel-Like Transcription Factors / genetics*
  • Kruppel-Like Transcription Factors / metabolism
  • Models, Biological
  • NF-kappa B / metabolism*
  • Promoter Regions, Genetic / genetics
  • RNA, Long Noncoding / genetics*
  • RNA, Long Noncoding / metabolism
  • Transcription, Genetic

Substances

  • DNMT3A protein, human
  • KLF4 protein, human
  • Kruppel-Like Factor 4
  • Kruppel-Like Transcription Factors
  • NF-kappa B
  • RNA, Long Noncoding
  • long noncoding RNA NKILA, human
  • DNA (Cytosine-5-)-Methyltransferases
  • DNA Methyltransferase 3A