PacBio Genome Sequences of Escherichia coli Serotype O157:H7, Diffusely Adherent E. coli, and Salmonella enterica Strains, All Carrying Plasmids with an mcr-1 Resistance Gene

Rebecca L Lindsey; Dhwani Batra; Peyton Smith; Pooja N Patel; Kaitlin A Tagg; Lisley Garcia-Toledo; Vladimir N Loparev; Phalasy Juieng; Mili Sheth; Yoo Jin Joung; Lori A Rowe

doi:10.1128/MRA.01025-18

PacBio Genome Sequences of Escherichia coli Serotype O157:H7, Diffusely Adherent E. coli, and Salmonella enterica Strains, All Carrying Plasmids with an mcr-1 Resistance Gene

Microbiol Resour Announc. 2018;7(14):e01025-18. doi: 10.1128/MRA.01025-18. Epub 2018 Oct 11.

Authors

Rebecca L Lindsey¹, Dhwani Batra², Peyton Smith^{1

3}, Pooja N Patel^{1

3}, Kaitlin A Tagg⁴, Lisley Garcia-Toledo^{1

3}, Vladimir N Loparev², Phalasy Juieng², Mili Sheth², Yoo Jin Joung^{1

3}, Lori A Rowe²

Affiliations

¹ Enteric Diseases Laboratory Branch, Division of Foodborne, Waterborne, and Environmental Diseases, Centers for Disease Control and Prevention, Atlanta, Georgia, USA.
² Biotechnology Core Facility Branch, Division of Scientific Resources, Centers for Disease Control and Prevention, Atlanta, Georgia, USA.
³ Oak Ridge Institute for Science and Education, Oak Ridge, Tennessee, USA.
⁴ IHRC, Inc., Atlanta, Georgia, USA.

Abstract

We report here Illumina-corrected PacBio whole-genome sequences of an Escherichia coli serotype O157:H7 strain (2017C-4109), an E. coli serotype O[undetermined]:H2 strain (2017C-4173W12), and a Salmonella enterica subsp. enterica serovar Enteritidis strain (2017K-0021), all of which carried the mcr-1 resistance gene on an IncI2 or IncX4 plasmid. We also determined that pMCR-1-CTSe is identical to a previously published plasmid, pMCR-1-CT.

Grants and funding

CC999999/Intramural CDC HHS/United States