Structure and Catalytic Mechanism of a Bacterial Friedel-Crafts Acylase

Chembiochem. 2019 Jan 2;20(1):88-95. doi: 10.1002/cbic.201800462. Epub 2018 Nov 26.

Abstract

C-C bond-forming reactions are key transformations for setting up the carbon frameworks of organic compounds. In this context, Friedel-Crafts acylation is commonly used for the synthesis of aryl ketones, which are common motifs in many fine chemicals and natural products. A bacterial multicomponent acyltransferase from Pseudomonas protegens (PpATase) catalyzes such Friedel-Crafts C-acylation of phenolic substrates in aqueous solution, reaching up to >99 % conversion without the need for CoA-activated reagents. We determined X-ray crystal structures of the native and ligand-bound complexes. This multimeric enzyme consists of three subunits: PhlA, PhlB, and PhlC, arranged in a Phl(A2 C2 )2 B4 composition. The structure of a reaction intermediate obtained from crystals soaked with the natural substrate 1-(2,4,6-trihydroxyphenyl)ethanone together with site-directed mutagenesis studies revealed that only residues from the PhlC subunits are involved in the acyl transfer reaction, with Cys88 very likely playing a significant role during catalysis. These structural and mechanistic insights form the basis of further enzyme engineering efforts directed towards enhancing the substrate scope of this enzyme.

Keywords: Friedel-Crafts acylation; X-ray diffraction; acyltransferases; multicomponent enzymes; solid-state structures; transferases.

Publication types

  • Research Support, Non-U.S. Gov't

MeSH terms

  • Acylation
  • Acyltransferases / chemistry*
  • Acyltransferases / genetics
  • Acyltransferases / metabolism
  • Bacterial Proteins / chemistry*
  • Bacterial Proteins / genetics
  • Bacterial Proteins / metabolism
  • Biocatalysis
  • Crystallography, X-Ray
  • Mutagenesis, Site-Directed
  • Mutation
  • Phloroglucinol / analogs & derivatives
  • Phloroglucinol / chemistry
  • Phloroglucinol / metabolism
  • Protein Binding
  • Protein Subunits / chemistry
  • Protein Subunits / genetics
  • Protein Subunits / metabolism
  • Pseudomonas / enzymology

Substances

  • Bacterial Proteins
  • Protein Subunits
  • monoacetylphloroglucinol
  • Phloroglucinol
  • Acyltransferases