[DNA Barcode Screening and Identifying for Anredera cordifolia and Its Related Species]

Zhong Yao Cai. 2016 Jun;39(6):1236-40.
[Article in Chinese]

Abstract

Objective: To identify Anredera cordifolia and its closely related species using the DNA barcode.

Methods: 28 individuals of Anredera cordifolia and its close related species were collected from different habitats. ITS and ITS2 of ribosomal DNA,matK,rbcL and psb A-trn H of chloroplast DNA were amplified and sequenced. The amplification and sequencing success rate,barcoding gap,and NJ trees were used to evaluate the efficiency of species identification.

Results: After amplified and sequenced, base deletion was occurred in psb A-trnH sequences of Basella alba. The sequencing success rates of mat K,rbc L,ITS and ITS2 were 100%,100%,78. 75% and64. 28%,respectively. Among the four DNA barcoding sequences,ITS and mat K had remarkable barcoding gap. The NJ tree showed that Anredera cordifolia could differed obviously from its closely related species by ITS and mat K.

Conclusion: The sequences of ITS and matK provide an effective and fast tool for the identification and authentication of medicinal plant of Anredera cordifolia and its related species.

MeSH terms

  • DNA Barcoding, Taxonomic*
  • DNA, Chloroplast
  • DNA, Ribosomal Spacer
  • Plants, Medicinal
  • Species Specificity
  • Trees

Substances

  • DNA, Chloroplast
  • DNA, Ribosomal Spacer