Tyrosine substitution of a conserved active-site histidine residue activates Plasmodium falciparum peroxiredoxin 6

Protein Sci. 2019 Jan;28(1):100-110. doi: 10.1002/pro.3490. Epub 2018 Oct 31.

Abstract

Peroxiredoxins efficiently remove hydroperoxides and peroxynitrite in pro- and eukaryotes. However, isoforms of one subfamily of peroxiredoxins, the so-called Prx6-type enzymes, usually have very low activities in standard peroxidase assays in vitro. In contrast to other peroxiredoxins, Prx6 homologues share a conserved histidyl residue at the bottom of the active site. Here we addressed the role of this histidyl residue for redox catalysis using the Plasmodium falciparum homologue PfPrx6 as a model enzyme. Steady-state kinetics with tert-butyl hydroperoxide (tBuOOH) revealed that the histidyl residue is nonessential for Prx6 catalysis and that a replacement with tyrosine can even increase the enzyme activity four- to six-fold in vitro. Stopped-flow kinetics with reduced PfPrx6WT , PfPrx6C128A , and PfPrx6H39Y revealed a preference for H2 O2 as an oxidant with second order rate constants for H2 O2 and tBuOOH around 2.5 × 107 M-1 s-1 and 3 × 106 M-1 s-1 , respectively. Differences between the oxidation kinetics of PfPrx6WT , PfPrx6C128A , and PfPrx6H39Y were observed during a slower second-reaction phase. Our kinetic data support the interpretation that the reductive half-reaction is the rate-limiting step for PfPrx6 catalysis in steady-state measurements. Whether the increased activity of PfPrx6H39Y is caused by a facilitated enzyme reduction because of a destabilization of the fully folded enzyme conformation remains to be analyzed. In summary, the conserved histidyl residue of Prx6-type enzymes is non-essential for catalysis, PfPrx6 is rapidly oxidized by hydroperoxides, and the gain-of-function mutant PfPrx6H39Y might provide a valuable tool to address the influence of conformational changes on the reactivity of Prx6 homologues.

Keywords: 1-Cys Prx; Plasmodium falciparum; Prx6; enzyme mechanism; peroxiredoxin catalysis; steady-state kinetics; stopped-flow kinetics.

Publication types

  • Research Support, Non-U.S. Gov't

MeSH terms

  • Amino Acid Substitution*
  • Catalytic Domain
  • Enzyme Activation / genetics
  • Gain of Function Mutation
  • Histidine / chemistry*
  • Histidine / genetics
  • Hydrogen Peroxide / chemistry
  • Kinetics
  • Oxidation-Reduction
  • Peroxiredoxin VI / chemistry*
  • Peroxiredoxin VI / genetics
  • Plasmodium falciparum / enzymology*
  • Plasmodium falciparum / genetics
  • Protozoan Proteins / chemistry*
  • Protozoan Proteins / genetics
  • Tyrosine / chemistry*
  • Tyrosine / genetics

Substances

  • Protozoan Proteins
  • Tyrosine
  • Histidine
  • Hydrogen Peroxide
  • Peroxiredoxin VI