Transcriptomic analysis identifies the key genes involved in stamen petaloid in lotus (Nelumbo nucifera)

BMC Genomics. 2018 Jul 27;19(1):554. doi: 10.1186/s12864-018-4950-0.

Abstract

Background: Flower morphology, a phenomenon regulated by a complex network, is one of the vital ornamental features in Nelumbo nucifera. Stamen petaloid is very prevalent in lotus flowers. However, the mechanism underlying this phenomenon is still obscure.

Results: Here, the comparative transcriptomic analysis was performed among petal, stamen petaloid and stamen through RNA-seq. Using pairwise comparison analysis, a large number of genes involved in hormonal signal transduction pathways and transcription factors, especially the MADS-box genes, were identified as candidate genes for stamen petaloid in lotus.

Conclusions: Taken together, these results provide an insight into the molecular networks underlying lotus floral organ development and stamen petaloid.

Keywords: Floral organ; Flower morphology; Nelumbo nucifera; Stamen Petaloid; Transcriptome analysis.

MeSH terms

  • Flowers / anatomy & histology
  • Flowers / genetics*
  • Flowers / metabolism
  • Gene Expression Profiling
  • Genes, Plant*
  • Nelumbo / anatomy & histology
  • Nelumbo / genetics*
  • Nelumbo / metabolism
  • Phenotype
  • Real-Time Polymerase Chain Reaction
  • Sequence Analysis, RNA
  • Transcriptome*