Crystal structure of the spliceosomal DEAH-box ATPase Prp2

Acta Crystallogr D Struct Biol. 2018 Jul 1;74(Pt 7):643-654. doi: 10.1107/S2059798318006356. Epub 2018 Jun 8.

Abstract

The DEAH-box ATPase Prp2 plays a key role in the activation of the spliceosome as it promotes the transition from the Bact to the catalytically active B* spliceosome. Here, four crystal structures of Prp2 are reported: one of the nucleotide-free state and three different structures of the ADP-bound state. The overall conformation of the helicase core, formed by two RecA-like domains, does not differ significantly between the ADP-bound and the nucleotide-free states. However, intrinsic flexibility of Prp2 is observed, varying the position of the C-terminal domains with respect to the RecA domains. Additionally, in one of the structures a unique ADP conformation is found which has not been observed in any other DEAH-box, DEAD-box or NS3/NPH-II helicase.

Keywords: DEAH-box; Prp2; RNA helicase; spliceosome.

MeSH terms

  • Adenosine Diphosphate / chemistry*
  • Chaetomium / chemistry*
  • Crystallization
  • Crystallography, X-Ray
  • DEAD-box RNA Helicases / chemistry*
  • Fungal Proteins / chemistry*
  • Molecular Conformation
  • Protein Binding
  • Protein Conformation

Substances

  • Fungal Proteins
  • Adenosine Diphosphate
  • DEAD-box RNA Helicases

Grants and funding

This work was funded by Deutsche Forschungsgemeinschaft grant .