Significant association of PRMT6 hypomethylation with colorectal cancer

J Clin Lab Anal. 2018 Nov;32(9):e22590. doi: 10.1002/jcla.22590. Epub 2018 Jun 21.

Abstract

Background: Protein arginine N-methyltransferase 6 (PRMT6) was deemed to be indispensable in the variety of biological processes. Upregulated PRMT6 was found in various human diseases including cancer. Herein, we investigated the performance of PRMT6 methylation in the diagnosis for CRC.

Methods: A quantitative methylation-specific polymerase chain reaction (qMSP) method was used to measure PRMT6 promoter methylation. The percentage of methylated reference (PMR) was applied to represent gene methylation level.

Results: Our data indicated that PRMT6 promoter methylation levels were significantly lower in CRC tissues than those in paired nontumor tissues (median PMR: 36.93% vs 63.12%, P = 1E-6) and normal intestinal tissues (median PMR: 36.93% vs 506.55%, P = 8E-12). We further examined the potential role of PRMT6 hypomethylation by the receiver operating characteristic (ROC) curve. Our results showed that the area under the curve (AUC) was 0.644 (95% CI = 0.596-0.733) between CRC tissues and paired nontumor tissues, 0.958 (95% CI = 0.919-0.998) between CRC tissues and normal intestinal tissues, and 0.899 (95% CI = 0.825-0.972) between paired nontumor tissues and normal intestinal tissues.

Conclusion: Our study firstly indicated that the hypomethylation of PRMT6 promoter could be a novel diagnostic biomarker for CRC.

Keywords: DNA methylation; colorectal cancer; protein arginine N-methyltransferase 6; quantitative methylation-specific polymerase chain reaction.

MeSH terms

  • Age Factors
  • Aged
  • Colorectal Neoplasms / genetics*
  • DNA Methylation / genetics*
  • Datasets as Topic
  • Female
  • Gene Expression Regulation, Neoplastic / physiology*
  • Genetic Association Studies
  • Humans
  • Male
  • Middle Aged
  • Nuclear Proteins / genetics*
  • Promoter Regions, Genetic / genetics
  • Protein-Arginine N-Methyltransferases / genetics*
  • ROC Curve

Substances

  • Nuclear Proteins
  • PRMT6 protein, human
  • Protein-Arginine N-Methyltransferases

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