Flow Cytometry and Fluorescence Microscopy as Tools for Structural and Functional Analysis of Vacuoles Isolated from Yeast and Plant Cells

Methods Mol Biol. 2018:1789:101-115. doi: 10.1007/978-1-4939-7856-4_8.

Abstract

A series of optimized protocols to isolate vacuoles from both yeast and plant cells, and to characterize the purified organelles at a functional and structural level, are described. For this purpose, we took advantage of the combined use of cell fractionation techniques with different fluorescence-based approaches namely flow cytometry, fluorescence microscopy and spectrofluorimetry. These protocols altogether constitute valuable tools for the study of vacuole structure and function, as well as for the high-throughput screening of drug libraries to identify new molecules that target the vacuole.

Keywords: Flow cytometry; Fluorescence microscopy; Isolated vacuoles; Plant cell; Yeast.

MeSH terms

  • Acridine Orange / analysis
  • Aniline Compounds / analysis
  • Barbiturates / analysis
  • Calcium / analysis
  • Calcium / metabolism
  • Cell Fractionation / methods*
  • Flow Cytometry / methods*
  • Fluorescent Dyes / analysis
  • Isoxazoles / analysis
  • Microscopy, Fluorescence / methods*
  • Neutral Red / analysis
  • Pyridinium Compounds / analysis
  • Quaternary Ammonium Compounds / analysis
  • Staining and Labeling / methods
  • Vacuolar Proton-Translocating ATPases / analysis
  • Vacuolar Proton-Translocating ATPases / metabolism
  • Vacuoles / chemistry
  • Vacuoles / enzymology
  • Vacuoles / metabolism*
  • Vacuoles / ultrastructure*
  • Vitis / chemistry
  • Vitis / cytology*
  • Vitis / enzymology
  • Vitis / metabolism
  • Xanthenes / analysis
  • Yeasts / chemistry
  • Yeasts / cytology*
  • Yeasts / enzymology
  • Yeasts / metabolism

Substances

  • Aniline Compounds
  • Barbiturates
  • FM1 43
  • Fluo 4
  • Fluorescent Dyes
  • Isoxazoles
  • Pyridinium Compounds
  • Quaternary Ammonium Compounds
  • Xanthenes
  • bis(1,3-dibutylbarbiturate)trimethine oxonol
  • Neutral Red
  • Vacuolar Proton-Translocating ATPases
  • Acridine Orange
  • Calcium