Antibody-Mediated Small Molecule Detection Using Programmable DNA-Switches

Anal Chem. 2018 Jul 3;90(13):8196-8201. doi: 10.1021/acs.analchem.8b01584. Epub 2018 Jun 13.

Abstract

The development of rapid, cost-effective, and single-step methods for the detection of small molecules is crucial for improving the quality and efficiency of many applications ranging from life science to environmental analysis. Unfortunately, current methodologies still require multiple complex, time-consuming washing and incubation steps, which limit their applicability. In this work we present a competitive DNA-based platform that makes use of both programmable DNA-switches and antibodies to detect small target molecules. The strategy exploits both the advantages of proximity-based methods and structure-switching DNA-probes. The platform is modular and versatile and it can potentially be applied for the detection of any small target molecule that can be conjugated to a nucleic acid sequence. Here the rational design of programmable DNA-switches is discussed, and the sensitive, rapid, and single-step detection of different environmentally relevant small target molecules is demonstrated.

Publication types

  • Research Support, Non-U.S. Gov't

MeSH terms

  • Animals
  • Antibodies / immunology*
  • Base Sequence
  • Biosensing Techniques / economics
  • Biosensing Techniques / methods*
  • Cost-Benefit Analysis
  • DNA Probes / chemistry*
  • DNA Probes / genetics
  • Immunoassay / economics
  • Immunoassay / methods*
  • Kainic Acid / analogs & derivatives
  • Kainic Acid / analysis
  • Kainic Acid / immunology
  • Limit of Detection
  • Time Factors

Substances

  • Antibodies
  • DNA Probes
  • domoic acid
  • Kainic Acid