Redox-dependent control of i-Motif DNA structure using copper cations

Nucleic Acids Res. 2018 Jul 6;46(12):5886-5893. doi: 10.1093/nar/gky390.

Abstract

Previous computational studies have shown that Cu+ can act as a substitute for H+ to support formation of cytosine (C) dimers with similar conformation to the hemi-protonated base pair found in i-motif DNA. Through a range of biophysical methods, we provide experimental evidence to support the hypothesis that Cu+ can mediate C-C base pairing in i-motif DNA and preserve i-motif structure. These effects can be reversed using a metal chelator, or exposure to ambient oxygen in the air that drives oxidation of Cu+ to Cu2+, a comparatively weak ligand. Herein, we present a dynamic and redox-sensitive system for conformational control of an i-motif forming DNA sequence in response to copper cations.

Publication types

  • Research Support, Non-U.S. Gov't

MeSH terms

  • Base Pairing
  • Cations
  • Copper / chemistry*
  • Cytosine / chemistry
  • DNA / chemistry*
  • Models, Molecular
  • Nucleotide Motifs
  • Oxidation-Reduction

Substances

  • Cations
  • Copper
  • Cytosine
  • DNA