Transcriptome Analysis in Chinese Cabbage (Brassica rapa ssp. pekinensis) Provides the Role of Glucosinolate Metabolism in Response to Drought Stress

Molecules. 2018 May 15;23(5):1186. doi: 10.3390/molecules23051186.

Abstract

Although drought stress is one of the most limiting factors in growth and production of Chinese cabbage (Brassica rapa L. ssp. pekinensis), the underlying biochemical and molecular causes are poorly understood. In the present study, to address the mechanisms underlying the drought responses, we analyzed the transcriptome profile of Chinese cabbage grown under drought conditions. Drought stress transcriptionally activated several transcription factor genes, including AP2/ERFs, bHLHs, NACs and bZIPs, and was found to possibly result in transcriptional variation in genes involved in organic substance metabolic processes. In addition, comparative expression analysis of selected BrbZIPs under different stress conditions suggested that drought-induced BrbZIPs are important for improving drought tolerance. Further, drought stress in Chinese cabbage caused differential acclimation responses in glucosinolate metabolism in leaves and roots. Analysis of stomatal aperture indicated that drought-induced accumulation of glucosinolates in leaves directly or indirectly controlled stomatal closure to prevent water loss, suggesting that organ-specific responses are essential for plant survival under drought stress condition. Taken together, our results provide information important for further studies on molecular mechanisms of drought tolerance in Chinese cabbage.

Keywords: Chinese cabbage; bZIP transcription factor; differentially expressed genes; drought stress; glucosinolate.

MeSH terms

  • Brassica rapa / genetics*
  • Brassica rapa / metabolism*
  • Carbohydrate Metabolism
  • Computational Biology / methods
  • Droughts*
  • Gene Expression Profiling
  • Gene Expression Regulation, Plant*
  • Glucosinolates / metabolism*
  • High-Throughput Nucleotide Sequencing
  • Molecular Sequence Annotation
  • Phenotype
  • Stress, Physiological*
  • Transcription Factors / genetics
  • Transcription Factors / metabolism
  • Transcriptome*

Substances

  • Glucosinolates
  • Transcription Factors