The KDM4A/KDM4C/NF-κB and WDR5 epigenetic cascade regulates the activation of B cells

Nucleic Acids Res. 2018 Jun 20;46(11):5547-5560. doi: 10.1093/nar/gky281.

Abstract

T follicular helper (Tfh) cell-derived signals promote activation and proliferation of antigen-primed B cells. It remains unclear whether epigenetic regulation is involved in the B cell responses to Tfh cell-derived signals. Here, we demonstrate that Tfh cell-mimicking signals induce the expression of histone demethylases KDM4A and KDM4C, and the concomitant global down-regulation of their substrates, H3K9me3/me2, in B cells. Depletion of KDM4A and KDM4C potentiates B cell activation and proliferation in response to Tfh cell-derived signals. ChIP-seq and de novo motif analysis reveals NF-κB p65 as a binding partner of KDM4A and KDM4C. Their co-targeting to Wdr5, a MLL complex member promoting H3K4 methylation, up-regulates cell cycle inhibitors Cdkn2c and Cdkn3. Thus, Tfh cell-derived signals trigger KDM4A/KDM4C - WDR5 - Cdkn2c/Cdkn3 cascade in vitro, an epigenetic mechanism regulating proper proliferation of activated B cells. This pathway is dysregulated in B cells from systemic lupus erythematosus patients and may represent a pathological link.

Publication types

  • Research Support, Non-U.S. Gov't

MeSH terms

  • Animals
  • B-Lymphocytes / immunology*
  • Cell Proliferation
  • Cells, Cultured
  • Cyclin-Dependent Kinase Inhibitor Proteins / metabolism*
  • Cyclin-Dependent Kinase Inhibitor p18 / metabolism*
  • Epigenesis, Genetic / genetics
  • Histone Demethylases / metabolism*
  • Intracellular Signaling Peptides and Proteins
  • Jumonji Domain-Containing Histone Demethylases / metabolism*
  • Lupus Erythematosus, Systemic / pathology
  • Lymphocyte Activation / immunology
  • Mice
  • Mice, Inbred C57BL
  • Mice, Transgenic
  • Protein Binding / genetics
  • Protein Tyrosine Phosphatases / metabolism*
  • Proteins / metabolism*
  • T-Lymphocytes, Helper-Inducer / immunology
  • Transcription Factor RelA / metabolism*
  • Up-Regulation / genetics

Substances

  • Cdkn2c protein, mouse
  • Cyclin-Dependent Kinase Inhibitor Proteins
  • Cyclin-Dependent Kinase Inhibitor p18
  • Intracellular Signaling Peptides and Proteins
  • Proteins
  • Rela protein, mouse
  • Transcription Factor RelA
  • Wdr5 protein, mouse
  • Histone Demethylases
  • JMJD2A protein, mouse
  • Jmjd2c protein, mouse
  • Jumonji Domain-Containing Histone Demethylases
  • Cdkn3 protein, mouse
  • Protein Tyrosine Phosphatases