Temporospatial induction of homeodomain gene cut dictates natural lineage reprogramming

Elife. 2018 May 1:7:e33934. doi: 10.7554/eLife.33934.

Abstract

Understanding how cellular identity naturally interconverts with high efficiency and temporospatial precision is crucial for regenerative medicine. Here, we revealed a natural midgut-to-renal lineage conversion event during Drosophila metamorphosis and identified the evolutionarily-conserved homeodomain protein Cut as a master switch in this process. A steep Wnt/Wingless morphogen gradient intersects with a pulse of steroid hormone ecdysone to induce cut expression in a subset of midgut progenitors and reprogram them into renal progenitors. Molecularly, ecdysone-induced temporal factor Broad physically interacts with cut enhancer-bound Wnt pathway effector TCF/β-catenin and likely bridges the distant enhancer and promoter region of cut through its self-association. Such long-range enhancer-promoter looping could subsequently trigger timely cut transcription. Our results therefore led us to propose an unexpected poising-and-bridging mechanism whereby spatial and temporal cues intersect, likely via chromatin looping, to turn on a master transcription factor and dictate efficient and precise lineage reprogramming.

Keywords: D. melanogaster; Wnt/Wingless signaling; cell biology; developmental biology; ecdysone signaling pathway; enhancer-promoter looping; in vivo lineage reprogramming; organ-specific progenitor; stem cells; temporospatial integration.

Publication types

  • Research Support, N.I.H., Extramural
  • Research Support, Non-U.S. Gov't

MeSH terms

  • Animals
  • Biomechanical Phenomena
  • Cell Lineage*
  • Cellular Reprogramming*
  • Drosophila Proteins / genetics
  • Drosophila Proteins / metabolism*
  • Drosophila melanogaster / growth & development*
  • Drosophila melanogaster / physiology
  • Gene Expression Regulation*
  • Homeodomain Proteins / genetics
  • Homeodomain Proteins / metabolism*
  • Nuclear Proteins / genetics
  • Nuclear Proteins / metabolism*
  • Promoter Regions, Genetic
  • Stem Cells / cytology*
  • Stem Cells / metabolism
  • Transcription Factors / genetics
  • Transcription Factors / metabolism*
  • Wnt Proteins / genetics
  • Wnt Proteins / metabolism

Substances

  • Drosophila Proteins
  • Homeodomain Proteins
  • Nuclear Proteins
  • Transcription Factors
  • Wnt Proteins
  • ct protein, Drosophila