Molecular dissection of a natural transposable element invasion

Genome Res. 2018 Jun;28(6):824-835. doi: 10.1101/gr.228627.117. Epub 2018 Apr 30.

Abstract

The first tracking of the dynamics of a natural invasion by a transposable element (TE) provides unprecedented details on the establishment of host defense mechanisms against TEs. We captured a D. simulans population at an early stage of a P-element invasion and studied the spread of the TE in replicated experimentally evolving populations kept under hot and cold conditions. We analyzed the factors controlling the invasion by NGS, RNA-FISH, and gonadal dysgenesis assays. Under hot conditions, the P-element spread rapidly for 20 generations, but no further spread was noted later on. This plateauing of the invasion was mediated by the rapid emergence of P-element-specific piRNAs. Under cold conditions, we observed a lower expression of the P-element and a slower emergence of the piRNA defense, resulting in a three times slower invasion that continued beyond 40 generations. We conclude that the environment is a major factor determining the evolution of TEs in their host.

Publication types

  • Research Support, Non-U.S. Gov't

MeSH terms

  • Animals
  • DNA Transposable Elements / genetics*
  • Drosophila simulans / genetics
  • Evolution, Molecular*
  • Genetics, Population
  • Genome, Insect
  • RNA, Small Interfering / genetics*
  • Selection, Genetic / genetics*

Substances

  • DNA Transposable Elements
  • RNA, Small Interfering