Feasibility study of stain-free classification of cell apoptosis based on diffraction imaging flow cytometry and supervised machine learning techniques

Apoptosis. 2018 Jun;23(5-6):290-298. doi: 10.1007/s10495-018-1454-y.

Abstract

This study was to explore the feasibility of prediction and classification of cells in different stages of apoptosis with a stain-free method based on diffraction images and supervised machine learning. Apoptosis was induced in human chronic myelogenous leukemia K562 cells by cis-platinum (DDP). A newly developed technique of polarization diffraction imaging flow cytometry (p-DIFC) was performed to acquire diffraction images of the cells in three different statuses (viable, early apoptotic and late apoptotic/necrotic) after cell separation through fluorescence activated cell sorting with Annexin V-PE and SYTOX® Green double staining. The texture features of the diffraction images were extracted with in-house software based on the Gray-level co-occurrence matrix algorithm to generate datasets for cell classification with supervised machine learning method. Therefore, this new method has been verified in hydrogen peroxide induced apoptosis model of HL-60. Results show that accuracy of higher than 90% was achieved respectively in independent test datasets from each cell type based on logistic regression with ridge estimators, which indicated that p-DIFC system has a great potential in predicting and classifying cells in different stages of apoptosis.

Keywords: Apoptosis; Classification; Diffraction image; Machine learning; Stain-free.

Publication types

  • Validation Study

MeSH terms

  • Annexin A5
  • Apoptosis*
  • Diagnostic Imaging / methods
  • Feasibility Studies
  • Flow Cytometry / methods*
  • Humans
  • K562 Cells
  • Staining and Labeling
  • Supervised Machine Learning*

Substances

  • Annexin A5