Recent progress and prospects for advancing arachnid genomics

Curr Opin Insect Sci. 2018 Feb:25:51-57. doi: 10.1016/j.cois.2017.11.005. Epub 2017 Nov 21.

Abstract

Arachnids exhibit tremendous species richness and adaptations of biomedical, industrial, and agricultural importance. Yet genomic resources for arachnids are limited, with the first few spider and scorpion genomes becoming accessible in the last four years. We review key insights from these genome projects, and recommend additional genomes for sequencing, emphasizing taxa of greatest value to the scientific community. We suggest greater sampling of spiders whose genomes are understudied but hold important protein recipes for silk and venom production. We further recommend arachnid genomes to address significant evolutionary topics, including the phenotypic impact of genome duplications. A barrier to high-quality arachnid genomes are assemblies based solely on short-read data, which may be overcome by long-range sequencing and other emerging methods.

Publication types

  • Research Support, N.I.H., Extramural
  • Research Support, Non-U.S. Gov't
  • Research Support, U.S. Gov't, Non-P.H.S.
  • Review

MeSH terms

  • Animals
  • Arachnida / classification
  • Arachnida / genetics*
  • Evolution, Molecular
  • Genome*
  • Phylogeny
  • Silk / genetics
  • Spider Venoms / genetics

Substances

  • Silk
  • Spider Venoms