Transcriptome analysis provides insights into the delayed sticky disease symptoms in Carica papaya

Plant Cell Rep. 2018 Jul;37(7):967-980. doi: 10.1007/s00299-018-2281-x. Epub 2018 Mar 21.

Abstract

Global gene expression analysis indicates host stress responses, mainly those mediated by SA, associated to the tolerance to sticky disease symptoms at pre-flowering stage in Carica papaya. Carica papaya plants develop the papaya sticky disease (PSD) as a result of the combined infection of papaya meleira virus (PMeV) and papaya meleira virus 2 (PMeV2), or PMeV complex. PSD symptoms appear only after C. papaya flowers. To understand the mechanisms involved in this phenomenon, the global gene expression patterns of PMeV complex-infected C. papaya at pre-and post-flowering stages were assessed by RNA-Seq. The result was 633 and 88 differentially expressed genes at pre- and post-flowering stages, respectively. At pre-flowering stage, genes related to stress and transport were up-regulated while metabolism-related genes were down-regulated. It was observed that induction of several salicylic acid (SA)-activated genes, including PR1, PR2, PR5, WRKY transcription factors, ROS and callose genes, suggesting SA signaling involvement in the delayed symptoms. In fact, pre-flowering C. papaya treated with exogenous SA showed a tendency to decrease the PMeV and PMeV2 loads when compared to control plants. However, pre-flowering C. papaya also accumulated transcripts encoding a NPR1-inhibitor (NPR1-I/NIM1-I) candidate, genes coding for UDP-glucosyltransferases (UGTs) and several genes involved with ethylene pathway, known to be negative regulators of SA signaling. At post-flowering, when PSD symptoms appeared, the down-regulation of PR-1 encoding gene and the induction of BSMT1 and JA metabolism-related genes were observed. Hence, SA signaling likely operates at the pre-flowering stage of PMeV complex-infected C. papaya inhibiting the development of PSD symptoms, but the induction of its negative regulators prevents the full-scale and long-lasting tolerance.

Keywords: Carica papaya; Defense responses; Papaya meleira virus; Plant–virus interaction; SA signaling; Transcriptome.

MeSH terms

  • Carica / drug effects
  • Carica / genetics*
  • Carica / virology*
  • Flowers
  • Gene Expression Profiling
  • Gene Expression Regulation, Plant
  • Host-Pathogen Interactions / physiology
  • Plant Diseases / genetics
  • Plant Diseases / virology*
  • Plant Leaves / virology
  • Plant Proteins / genetics*
  • RNA Viruses / pathogenicity
  • RNA, Messenger
  • Real-Time Polymerase Chain Reaction
  • Reproducibility of Results
  • Salicylic Acid / metabolism
  • Salicylic Acid / pharmacology
  • Sequence Analysis, RNA

Substances

  • Plant Proteins
  • RNA, Messenger
  • Salicylic Acid