Classification and structural insight into vibriolysin-like proteases of Vibrio pathogenicity

Microb Pathog. 2018 Apr:117:335-340. doi: 10.1016/j.micpath.2018.03.002. Epub 2018 Mar 3.

Abstract

Vibriolysin-like proteases (VLPs) are important virulence agents in the arsenal of Vibrio causing instant cytotoxic effects during infection. Most of Vibrio secreted VLPs show serious pathogenicity, while some species of Vibrio with VLPs are non-pathogenic, like Vibrio tasmaniensis and Vibrio pacinii. To investigate the relation between VLPs and Vibrio pathogenicity, one phylogenetic tree of VLPs was constructed and compared consensus sequences at the N-terminus of VLPs. Based on these results, VLPs were defined into nine phylogenetic clades. Pathogenicity analysis of Vibrio showed that Vibrio species with VLPs III, VI, VII or VIII are serious pathogenic bacteria, while species with VLPs I, II, IV or IX are opportunistic pathogens. Multiple sequence alignment showed that the N-terminal 5-16 nucleotides of each clade are highly conservative. Topological analysis of VLPs exhibited the structural differences in N-terminal regions of each VLP clade. These results suggest that structure of N-terminus might play a key role in the pathogenicity of VLPs. Our findings give new insights into the classification of VLPs and the relationship between VLPs and Vibrio pathogenicity.

Keywords: Classification; Phylogenetic tree; Structure; Vibrio; Vibrio pathogenicity; Vibriolysin-like proteases (VLPs).

MeSH terms

  • Amino Acid Sequence
  • Bacterial Proteins / chemistry*
  • Bacterial Proteins / classification*
  • Bacterial Proteins / isolation & purification
  • Catalytic Domain
  • Metalloendopeptidases / chemistry
  • Metalloendopeptidases / classification
  • Metalloendopeptidases / isolation & purification
  • Metalloproteases / chemistry
  • Metalloproteases / classification
  • Models, Molecular
  • Peptide Hydrolases / chemistry*
  • Peptide Hydrolases / classification*
  • Peptide Hydrolases / isolation & purification
  • Phylogeny*
  • Protein Conformation
  • Protein Domains
  • Sequence Alignment
  • Vibrio / enzymology*
  • Vibrio / pathogenicity
  • Virulence

Substances

  • Bacterial Proteins
  • Metalloproteases
  • Peptide Hydrolases
  • Metalloendopeptidases