CHTyper, a Web Tool for Subtyping of Extraintestinal Pathogenic Escherichia coli Based on the fumC and fimH Alleles

J Clin Microbiol. 2018 Mar 26;56(4):e00063-18. doi: 10.1128/JCM.00063-18. Print 2018 Apr.

Affiliations

¹ Department of Bacteria, Parasites and Fungi, Statens Serum Institut, Copenhagen, Denmark.
² Department of Microbiology, University of Washington, Seattle, Washington, USA.
³ Department of Systems Biology, Technical University of Denmark, Kongens Lyngby, Denmark.
⁴ Department of Bacteria, Parasites and Fungi, Statens Serum Institut, Copenhagen, Denmark ama@ssi.dk.

No abstract available

Keywords: Escherichia coli; WGS.

Publication types

Letter
Research Support, Non-U.S. Gov't

MeSH terms

Adhesins, Escherichia coli / genetics*
Alleles
Escherichia coli Proteins / genetics*
Extraintestinal Pathogenic Escherichia coli / classification*
Extraintestinal Pathogenic Escherichia coli / genetics*
Extraintestinal Pathogenic Escherichia coli / pathogenicity
Fimbriae Proteins / genetics*
Genome, Bacterial
Humans
Software*

Substances

Adhesins, Escherichia coli
Escherichia coli Proteins
fimH protein, E coli
Fimbriae Proteins