Genotypic variability analysis of DENV-1 in Mexico reveals the presence of a novel Mexican lineage

Arch Virol. 2018 Jun;163(6):1643-1647. doi: 10.1007/s00705-018-3759-0. Epub 2018 Feb 9.

Abstract

Here, we report for the first time the circulation of dengue virus type 1 (DENV-1) belonging to the lineage IV of genotype V (African American genotype) based on phylogenetic analysis of nucleotide sequences from 10 DENV-1-positive samples obtained in Mexico between 2012 and 2014. Our data revealed that the lineages III and IV of DENV-1 genotype V were found circulating during the same period, probably explaining the rise in the number of cases of severe dengue during that period.

MeSH terms

  • Adolescent
  • Adult
  • Child
  • Dengue Virus / classification
  • Dengue Virus / genetics*
  • Dengue Virus / isolation & purification
  • Evolution, Molecular
  • Female
  • Founder Effect
  • Genetic Variation
  • Genotype*
  • Humans
  • Male
  • Mexico / epidemiology
  • Middle Aged
  • Molecular Epidemiology
  • Phylogeny*
  • Phylogeography
  • RNA, Viral / genetics*
  • Severe Dengue / diagnosis
  • Severe Dengue / epidemiology*
  • Severe Dengue / pathology
  • Severe Dengue / virology

Substances

  • RNA, Viral