Analysis of DICER1 in familial and sporadic cases of transposition of the great arteries

Congenit Heart Dis. 2018 May;13(3):401-406. doi: 10.1111/chd.12578. Epub 2018 Feb 5.

Abstract

Objective: We previously identified a pathogenic germline DICER1 variant in a child with transposition of the great arteries who was a member of a family with DICER1 syndrome. In view of a report linking Dicer1 knockout in murine cardiomyocytes to cardiac outflow defects, we investigated the involvement of DICER1 in transposition of the great arteries.

Design: We used Fluidigm access array followed by next generation sequencing to screen for variants in the coding exons, their exon/intron boundaries and the 3' untranslated region of DICER1 in patient DNA.

Cases: Germline DNA was collected from 129 patients with either sporadic or familial forms of transposition of the great arteries from two sites in Australia and Italy.

Results: Most cases (85%) did not have any germline DICER1 variants. In the remaining 15% of cases, we identified 16 previously reported variants (5 synonymous, 6 intronic, and 5 missense) and 2 novel variants (1 intronic and 1 missense). None of the identified variants were predicted to be pathogenic.

Conclusions: Here, we report that neither likely pathogenic nor pathogenic variants in DICER1 appear to play a major role in transposition of the great arteries.

Keywords: DICER1; fluidigm; next-generation sequencing; transposition of the great arteries.

MeSH terms

  • Child
  • DEAD-box RNA Helicases / genetics*
  • DEAD-box RNA Helicases / metabolism
  • DNA / genetics*
  • DNA Mutational Analysis
  • Exons
  • Female
  • Genetic Predisposition to Disease*
  • Humans
  • Incidence
  • Italy / epidemiology
  • Male
  • Mutation*
  • New South Wales / epidemiology
  • Pedigree
  • Ribonuclease III / genetics*
  • Ribonuclease III / metabolism
  • Transposition of Great Vessels / epidemiology
  • Transposition of Great Vessels / genetics*
  • Transposition of Great Vessels / metabolism

Substances

  • DNA
  • DICER1 protein, human
  • Ribonuclease III
  • DEAD-box RNA Helicases