Designing a biochip following multiplex polymerase chain reaction for the detection of Salmonella serovars Typhimurium, Enteritidis, Infantis, Hadar, and Virchow in poultry products

J Food Drug Anal. 2018 Jan;26(1):58-66. doi: 10.1016/j.jfda.2016.11.019. Epub 2017 Mar 7.

Abstract

Salmonella-contaminated foods, especially poultry-derived foods (eggs, chicken meat), are the major source of salmonellosis. Not only in the European Union (EU), but also in the United States, Japan, and other countries, has salmonellosis been an issue of concern for food safety control agencies. In 2005, EU regulation 1003/2005 set a target for the control and reduction of five target Salmonella enterica serovars-S. Typhimurium, S. Enteritidis, S. Infantis, S. Hadar, and S. Virchow-in breeding flocks. Thus, a simple biochip for the rapid detection of any of these five Salmonella serovars in poultry products may be required. The objectives of this study were to design S. Virchow-specific primers and to develop a biochip for the simultaneous identification of all or any of these five Salmonella serovars in poultry and poultry products. Experimentally, we designed novel polymerase chain reaction (PCR) primers for the specific detection of S. Virchow, S. Infantis, and S. Hadar. The specificity of all these primers and two known primer sets for S. Typhimurium and S. Enteritidis was then confirmed under the same PCR conditions using 57 target strains and 112 nontarget Salmonella strains as well as 103 non-Salmonella strains. Following multiplex PCR, strains of any of these five Salmonella serovars could be detected by a chromogenic biochip deployed with DNA probes specific to these five Salmonella serovars. In comparison with the multiplex PCR methods, the biochip assay could improve the detection limit of each of the Salmonella serovars from N×103 cfu/mL to N×102 cfu/mL sample in either the pure culture or the chicken meat samples. With an 8-hour enrichment step, the detection limit could reach up to N×100 cfu/mL.

Keywords: biochip for five Salmonella serovars; poultry products; primers for Salmonella Virchow.

Publication types

  • Research Support, Non-U.S. Gov't

MeSH terms

  • Animals
  • Equipment Design*
  • Food Microbiology* / methods
  • Food Safety
  • Lab-On-A-Chip Devices*
  • Multiplex Polymerase Chain Reaction*
  • Poultry Products / microbiology*
  • Salmonella / classification*
  • Salmonella / genetics*
  • Salmonella enterica
  • Salmonella typhimurium
  • Serogroup

Grants and funding

This study was funded by the grants from National Science Council, Taipei, Taiwan (Project no: NSC 99-2324-B-241-002-CC1 and NSC 102-2632-B-241-001-MY3), and also DR. Chip Biotech Inc. (Miao-Li County, Taiwan).